Receptor Abundance Estimation using Feature Selection and Gene Set Scoring

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Documentation for package ‘STREAK’ version 1.0.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

receptorAbundanceEstimation	Receptor abundance estimation for single cell RNA-sequencing (scRNA-seq) data using gene set scoring and thresholding.
receptorGeneSetConstruction	Gene sets weights membership matrix construction for receptor abundance estimation.
target.malt.rna.mat	Single cell RNA-sequencing (scRNA-seq) target subset of the 10X Genomics MALT counts.
train.malt.adt.mat	Cellular Indexing of Transcriptomes and Epitopes by Sequencing (CITE-seq) training subset of the 10X Genomics MALT counts.
train.malt.rna.mat	Single cell RNA-sequencing (scRNA-seq) training subset of the 10X Genomics MALT counts.