Table.N.Per {SNPassoc} | R Documentation |
Descriptive sample size and percentage
Description
This function computes sample size and percentage for each category of a categorical trait (e.g. case-control status) for each genotype (or combination of genotypes).
Usage
Table.N.Per(var, dep, subset = !is.na(var))
Arguments
var |
categorical trait. |
dep |
variable with genotypes or any combination of them |
subset |
an optional vector specifying a subset of observations to be used in the descriptive analysis. |
Value
tp |
A matrix giving sample size (n),and the percentage (%) for each level of the categorical trait for each genotype |
See Also
Examples
data(SNPs)
#sample size and percentage of cases and controls for each genotype
Table.N.Per(SNPs$snp10001,SNPs$casco)
# The same table for a subset (males)
Table.N.Per(SNPs$snp10001,SNPs$casco,SNPs$sex=="Male")
# The same table assuming a dominant model
Table.N.Per(dominant(snp(SNPs$snp10001,sep="")),SNPs$casco,SNPs$sex=="Male")
[Package SNPassoc version 2.1-0 Index]