alleleCount {SMITIDstruct}R Documentation

alleleCount

Description

count allele at each position

Usage

alleleCount(mat, seq.char = c("A", "T", "G", "C"))

Arguments

mat

a genomique seq list as matrix by row

seq.char

allele alphabet

Value

a matrix, each row as a unique seq and col as allele count by position


[Package SMITIDstruct version 0.0.5 Index]