ViralPop {SMITIDstruct}R Documentation

Class ViralPop

Description

Viral population data containing genotypes

Slots

ID

Host identifier

time

Observation time as numeric since 1970/01/01

size

Qt of variants

names

list of variants id with same sequence

genotypes

all variants genotypes (as DNAStringSet)

proportions

proportions of each variants

[Package SMITIDstruct version 0.0.5 Index]