transformation {SCdeconR}

Transformation of gene expression data

Description

Methods to use for data transformation.

Usage

transformation(matrix, option)

Arguments

matrix

a matrix-like objector of gene expression values with rows representing genes, columns representing samples or cells

option

character value specifying the transformation method to use. Has to be one of "none", "log", "sqrt", "vst".

Details

refer to scdecon for more details.

Value

a matrix-like object with the same dimension of input object after data transformation.