SCRIPsimGeneMeans {SCRIP}

Simulate gene means

Description

Simulate gene means from a gamma distribution. Also simulates outlier expression factors. Genes with an outlier factor not equal to 1 are replaced with the median mean expression multiplied by the outlier factor.

Usage

SCRIPsimGeneMeans(data, sim, params)

Arguments

data

raw dataset.

sim

SingleCellExperiment to add gene means to.

params

SplatParams object with simulation parameters.

Value

SingleCellExperiment with simulated gene means.