Robust Angle Based Joint and Individual Variation Explained
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Documentation for package ‘RaJIVE’ version 1.0
Help Pages
| ajive.data.sim | Simulation of data blocks |
| data_heatmap | Decomposition Heatmaps |
| decomposition_heatmaps_robustH | Decomposition Heatmaps |
| get_block_loadings | Block Loadings |
| get_block_scores | Block Scores |
| get_final_decomposition_robustH | Computes the final JIVE decomposition. |
| get_individual_decomposition_robustH | Computes the individual matrix for a data block. |
| get_individual_rank | Individual Rank |
| get_joint_decomposition_robustH | Computes the individual matrix for a data block |
| get_joint_rank | Joint Rank |
| get_joint_scores_robustH | Computes the joint scores. |
| get_random_direction_bound_robustH | Estimate the wedin bound for a data matrix. |
| get_svd_robustH | Computes the robust SVD of a matrix Using robRsvd |
| get_sv_threshold | The singular value threshold. |
| get_wedin_bound_samples | Gets the wedin bounds |
| Rajive | Robust Angle based Joint and Individual Variation Explained |
| RobRSVD.all | Computes the robust SVD of a matrix |
| showVarExplained_robust | Proportions of variance explained |
| sim_dist | Simulation of single data block from distribution |
| svd_reconstruction | Reconstruces the original matrix from its robust SVD. |
| truncate_svd | Truncates a robust SVD. |
| wedin_bound_resampling | Resampling procedure for the wedin bound |