RTIGER-class {RTIGER}

This class is a generic container for RTIGER analysis

Description

This class is a generic container for RTIGER analysis

Slots

matobs

Nested lists. the first level is a list of samples. For each sample there are 5 matrices that contains the allele counts for each position.

params

a list with the parameters after training.

info

List with phenotipic data of the samples.

Viterbi

List of chromosomes with the viterbi path per sample.

Probabilities

Computed probabilites for the EM algorithm.

num.iter

Number of iterations needed to stop the EM algorithm.