HDpath {RNAseqNet}R Documentation

Methods for 'HDpath' objects.

Description

Methods for the result of imputedGLMnetwork (HDpath object)

Usage

## S3 method for class 'HDpath'
summary(object, ...)

## S3 method for class 'HDpath'
print(x, ...)

## S3 method for class 'HDpath'
plot(x, ...)

Arguments

object

HDpath object

...

not used

x

HDpath object

Author(s)

Alyssa Imbert, alyssa.imbert@gmail.com

Nathalie Vialaneix, nathalie.vialaneix@inrae.fr

See Also

imputedGLMnetwork

Examples

data(lung)
data(thyroid)
nobs <- nrow(lung)
miss_ind <- sample(1:nobs, round(0.2 * nobs), replace = FALSE)
lung[miss_ind, ] <- NA
lung <- na.omit(lung)
lambdas <- 4 * 10^(seq(0, -2, length = 10))
## Not run: 
lung_hdmi <- imputedGLMnetwork(lung, thyroid, sigma = 2, lambdas = lambdas,
                               m = 10, B = 5)
plot(lung_hdmi)

## End(Not run)


[Package RNAseqNet version 0.1.5 Index]