ci.curve |
Confidence bands |
c_helper |
Contact rate function. |
estimate.mle |
Fit the Model |
find_ends |
Detect end of waves |
find_starts |
Detect start of waves |
load_config |
Load configuration file |
log_lklh |
The likelihood function |
navigate_to_config |
Navigate to the config file |
plot_outputs |
Plotting function |
pred.curve |
Epidemic Curve Model |
ranges_to_waves |
Utility function for range manipulation |
re_predict |
Demo of main functions |
rt_empirical |
Empirical estimate of R_t |
serial.helper |
Serial interval |
waves_1d_list |
Utility function for range manipulation |