dataType {RDML} | R Documentation |
dataType R6 class.
Description
Inherits: rdmlBaseType.
Usage
dataType
Format
An R6Class
generator object.
Initialization
dataType$new(tar, cq = NULL, excl = NULL, adp = NULL, mdp = NULL, endPt = NULL, bgFluor = NULL, bgFluorSlp = NULL, quantFluor = NULL)
Fields
tar
idReferencesType. TargetID - A reference to a target.
cq
checkNumber. Calculated fractional PCR cycle used for downstream quantification. Negative values express following condition: Not Available: -1.0
excl
checkString. Excluded. If
excl
is present, this entry should not be evaluated. Do not set this element toFALSE
if the entry is valid. Instead, leave the entireexcl
element out instead. It may contain a string with a reason for the exclusion. Several reasons for exclusion should be seperated by semicolons ";".adp
mdp
endPt
. Value of the endpoint measurement.
bgFluor
checkNumber. Background fluorescence (the y-intercept of the baseline trend based on the estimated background fluorescence).
bgFluorSlp
checkNumber. Background fluorescence slope - The slope of the baseline trend based on the estimated background fluorescence. The element should be absent to indicate a slope of 0.0; If this element is present without the
bgFluor
element it should be ignored.quantFluor
checkNumber. Quantification flourescence - The fluorescence value corresponding to the treshold line.
Methods
AsDataFrame(dp.type = "adp")
Represents amplification (
dp.type = "adp"
) or melting (
dp.type = "mdp"
) data points asdata.frame