test3Gsm {R2ucare}

Test3G.SM

Description

This function performs Test3G.SM

Usage

test3Gsm(X, freq, verbose = TRUE, rounding = 3)

Arguments

X

is a matrix of encounter histories with K occasions

freq

is a vector of the number of individuals with the corresponding encounter history

verbose

controls the level of the details in the outputs; default is TRUE for all details

rounding

is the level of rounding for outputs; default is 3

Value

This function returns a list with first component the overall test and second component a data.frame with occasion, site, the value of the test statistic, degree of freedom, p-value and test performed (chi-square, Fisher or none).

Author(s)

Olivier Gimenez <[e-mail]>, Roger Pradel, Rémi Choquet

Examples

# Read in Geese dataset:
geese = system.file("extdata", "geese.inp", package = "R2ucare")
geese = read_inp(geese)

# Get encounter histories and number of individuals with corresponding histories
geese.hist = geese$encounter_histories
geese.freq = geese$sample_size

# perform Test.3.GSm
test3Gsm(geese.hist,geese.freq)