Goodness-of-Fit Tests for Capture-Recapture Models

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Documentation for package ‘R2ucare’ version 1.0.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

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coef_mixtures	Estimation of multinomial mixture distributions parameters
deviance_mixture	Deviance of multinomial mixture distributions
expval_table	Expected values in a contingency table
gof_test	Goodness-of-fit test for contingency tables
group_data	Group individual capture-recapture data in encounter histories
group_data_gen	Group individual capture-recapture data in encounter histories along specific column(s)
ind_test_22	Test of independence for 2x2 contingency tables
ind_test_rc	Test of independence for rxc contingency tables
inv_logit_gen	Inverse generalized logit link
marray	m-array: table of first recaptures
multimarray	Multistate m-array
overall_CJS	Overall goodness-of-fit test for the Cormack-Jolly-Seber model
overall_JMV	Overall goodness-of-fit test for the Jolly-Move model
pool2K	Pooling algorithm
pooling_ct	Pooling algorithm (multisite goodness-of-fit tests)
pooling_mixtures	Pooling algorithm (multisite goodness-of-fit tests)
read_headed	Read capture-recapture data with Headed format used by program E-SURGE
read_inp	Read capture-recapture data with Input (.inp) format used by program MARK
reconstitution	Reformat outputs of multinomial mixture distributions parameters
repmat	Replicate and tile a matrix
test2cl	Test2.CL
test2ct	Test2.CT
test3Gsm	Test3G.SM
test3Gsr	Test3G.SR
test3Gwbwa	Test3G.WBWA
test3sm	Test3.SM
test3sr	Test3.SR
testMitec	TestM.ITEC
testMltec	TestM.LTEC
ungroup_data	Ungroup encounter capture-recapture data in individual histories