R2admb-package |
ADMB to R interface functions |
admb_version |
Query ADMB version |
AIC.admb |
Standard accessor functions for ADMB model fits |
clean_admb |
Set up AD Model Builder environment variables |
coef.admb |
Standard accessor functions for ADMB model fits |
compile_admb |
Compile ADMB files, run, read output |
confint.admb |
Standard accessor functions for ADMB model fits |
dat_write |
Write parameter and data files for ADMB |
deviance.admb |
Standard accessor functions for ADMB model fits |
do_admb |
Compile and/or run an ADMB model, collect output |
extract_gradient |
Extract gradients |
find_large_cor |
Find large correlations |
logLik.admb |
Standard accessor functions for ADMB model fits |
mcmc.control |
Control options for MCMC after ADMB fitting |
plot.admb_hist |
Plot MCMC histogram |
print.admb |
Standard accessor functions for ADMB model fits |
print.summary.admb |
Standard accessor functions for ADMB model fits |
R2admb |
ADMB to R interface functions |
read_admb |
Compile ADMB files, run, read output |
read_pars |
Read in parameters from an AD Model Builder run |
read_plt |
Read in ADMB profile file |
read_psv |
Read in parameters from an AD Model Builder run |
read_rep |
Read in parameters from an AD Model Builder run |
run.control |
set run options for running ADMB via R |
run_admb |
Compile ADMB files, run, read output |
setup_admb |
Set up AD Model Builder environment variables |
stdEr |
Standard accessor functions for ADMB model fits |
stdEr.admb |
Standard accessor functions for ADMB model fits |
summary.admb |
Standard accessor functions for ADMB model fits |
vcov.admb |
Standard accessor functions for ADMB model fits |
write_dat |
Write parameter and data files for ADMB |
write_pin |
Write parameter and data files for ADMB |