gigwa_get_samples {QBMS} | R Documentation |
Get the Samples List of the Current Active GIGWA Run
Description
This function retrieves the samples list of the current active run as configured in the internal state object using the 'gigwa_set_run()' function.
Usage
gigwa_get_samples()
Value
A vector of all samples in the selected run.
Author(s)
Khaled Al-Shamaa, k.el-shamaa@cgiar.org
See Also
set_qbms_config
, gigwa_set_run
Examples
if (interactive()) {
# Configure your GIGWA connection
set_qbms_config("https://gigwa.southgreen.fr/gigwa/",
time_out = 300, engine = "gigwa", no_auth = TRUE)
# Select a database by name
gigwa_set_db("Sorghum-JGI_v1")
# Select a project by name
gigwa_set_project("Nelson_et_al_2011")
# Select a specific run by name
gigwa_set_run("run1")
# Get a list of all samples in the selected run
samples <- gigwa_get_samples()
}
[Package QBMS version 1.0.0 Index]