| shifts_to_simmap {PhylogeneticEM} | R Documentation |
Simmap format mapping from list of edges
Description
shifts_to_simmap takes a vector of edges where the shifts occur, and return a
simmap formatted tree, mapped with corresponding regimes.
Usage
shifts_to_simmap(tree, shifts_edges)
Arguments
tree |
input tree in |
shifts_edges |
shifts positions on the edges |
Details
Ancestral state is always 0, and other states are consecutive integers.
Value
tree a simmap object
[Package PhylogeneticEM version 1.7.0 Index]