MatrixDataCheck {PerseusR} | R Documentation |
MatrixDataCheck: a function to check the validity of an object as a perseus data frame
Description
Check perseus compatibility of an object
Usage
MatrixDataCheck(object, ...)
## Default S3 method:
MatrixDataCheck(object = NULL, main, annotationRows,
annotationCols, descriptions, imputeData, qualityData, all_colnames, ...)
## S3 method for class 'matrixData'
MatrixDataCheck(object, ...)
## S3 method for class 'list'
MatrixDataCheck(object, ...)
## S3 method for class 'ExpressionSet'
MatrixDataCheck(object, ...)
Arguments
object |
object to check consistency with perseus data frames |
... |
additional arguments passed to the respective method |
main |
Main Data frame |
annotationRows |
Rows containing annotation information |
annotationCols |
Columns containing annotation information |
descriptions |
Descriptions of all the columns |
imputeData |
Is imputed or not |
qualityData |
quality number |
all_colnames |
The colnames to be used |
Value
a logical indicating the validity of the object (or series of objects) as a perseus DF or the string of errors
NULL
NULL
NULL
Examples
require(PerseusR)
mat <- matrixData(
main=data.frame(a=1:3, b=6:8),
annotCols=data.frame(c=c('a','b','c')),
annotRows=data.frame(x=factor(c('1','1'))))
MatrixDataCheck(mat)
[Package PerseusR version 0.3.4 Index]