clustExploration,omics_array-method {Patterns} | R Documentation |
A function to explore a dataset and cluster its rows.
Description
Based on soft clustering performed by the Mfuzz package.
Usage
## S4 method for signature 'omics_array'
clustExploration(omicsarray, new.window = FALSE)
Arguments
omicsarray |
A omicsarray to cluster |
new.window |
Boolean. New X11 window for plots. Defaults to FALSE. |
Value
A data.frame of nrows(omicsarray) observations of 3 variables (name, cluster, maj.vote.index).
Author(s)
Bertrand Frederic, Myriam Maumy-Bertrand.
Examples
library(Patterns)
if(require(CascadeData)){
data(micro_S, package="CascadeData")
D<-Patterns::as.omics_array(micro_S[1:100,],1:4,6)
a<-clustExploration(D)
a
}
[Package Patterns version 1.5 Index]