analyze_network,omics_network-method {Patterns}

Analysing the network

Description

Calculates some indicators for each node in the network.

Usage

## S4 method for signature 'omics_network'
analyze_network(Omega, nv, label_v = NULL)

Arguments

Omega

a omics_network object

nv

the level of cutoff at which the analysis should be done

label_v

(optionnal) the name of the genes

Value

A matrix containing, for each node, its betweenness,its degree, its output, its closeness.

Author(s)

Bertrand Frederic, Myriam Maumy-Bertrand.

Examples

data(network)
analyze_network(network,nv=0)