ExampleBSseq {PQLseq} | R Documentation |
BSseq example dataset
Description
A simulated example dataset of BSseq for PQLseq.
Usage
data(ExampleBSseq)
Format
Contains the following objects:
- mcount
a data frame containing the read counts for 5 sites.
- predictor
a vector of 100 observations on a continuous variable.
- relatednessmatrix
a genetic relationship matrix for 100 individuals.
- totalcount
a data frame containing the total read counts for 5 sites.
Examples
data(ExampleBSseq)
attach(ExampleBSseq)
model_DNA=pqlseq(RawCountDataSet=mcount, Phenotypes=predictor,
RelatednessMatrix=relatednessmatrix, LibSize=totalcount,
fit.model="BMM",numCore=1)
head(model_DNA)
detach(ExampleBSseq)
[Package PQLseq version 1.2.1 Index]