Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies


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Documentation for package ‘PQLseq’ version 1.2.1

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PQLseq-package Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies
ExampleBSseq BSseq example dataset
ExampleRNAseq RNAseq example dataset
PQLseq Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies
pqlseq Fit Generalized Linear Mixed Model with Known Kinship Matrices Through Penalized-quasi Likelihood