Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Extended
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Documentation for package ‘PMCMRplus’ version 1.9.10
- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Code demos. Use demo() to run them.
- Package NEWS.
Help Pages
A B C D F G H J K L M N O P Q R S T U V W
-- A --
| adAllPairsTest | Anderson-Darling All-Pairs Comparison Test |
| adAllPairsTest.default | Anderson-Darling All-Pairs Comparison Test |
| adAllPairsTest.formula | Anderson-Darling All-Pairs Comparison Test |
| adKSampleTest | Anderson-Darling k-Sample Test |
| adKSampleTest.default | Anderson-Darling k-Sample Test |
| adKSampleTest.formula | Anderson-Darling k-Sample Test |
| adManyOneTest | Anderson-Darling Many-To-One Comparison Test |
| adManyOneTest.default | Anderson-Darling Many-To-One Comparison Test |
| adManyOneTest.formula | Anderson-Darling Many-To-One Comparison Test |
| algae | Algae Growth Inhibition Data Set |
-- B --
| barPlot | Plotting PMCMR Objects |
| bwsAllPairsTest | BWS All-Pairs Comparison Test |
| bwsAllPairsTest.default | BWS All-Pairs Comparison Test |
| bwsAllPairsTest.formula | BWS All-Pairs Comparison Test |
| bwsKSampleTest | Murakami's k-Sample BWS Test |
| bwsKSampleTest.default | Murakami's k-Sample BWS Test |
| bwsKSampleTest.formula | Murakami's k-Sample BWS Test |
| bwsManyOneTest | BWS Many-To-One Comparison Test |
| bwsManyOneTest.default | BWS Many-To-One Comparison Test |
| bwsManyOneTest.formula | BWS Many-To-One Comparison Test |
| bwsTrendTest | Testing against Ordered Alternatives (Murakami's BWS Trend Test) |
| bwsTrendTest.default | Testing against Ordered Alternatives (Murakami's BWS Trend Test) |
| bwsTrendTest.formula | Testing against Ordered Alternatives (Murakami's BWS Trend Test) |
-- C --
| chaAllPairsNashimotoTest | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
| chaAllPairsNashimotoTest.default | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
| chaAllPairsNashimotoTest.formula | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
| chackoTest | Testing against Ordered Alternatives (Chacko's Test) |
| chackoTest.default | Testing against Ordered Alternatives (Chacko's Test) |
| chackoTest.formula | Testing against Ordered Alternatives (Chacko's Test) |
| chenJanTest | Chen and Jan Many-to-One Comparisons Test |
| chenJanTest.default | Chen and Jan Many-to-One Comparisons Test |
| chenTest | Chen's Many-to-One Comparisons Test |
| chenTest.default | Chen's Many-to-One Comparisons Test |
| chenTest.formula | Chen's Many-to-One Comparisons Test |
| Cochran | Cochran's distribution |
| cochranTest | Cochran Test |
| cochranTest.default | Cochran Test |
| cochranTest.formula | Cochran Test |
| cuzickTest | Testing against Ordered Alternatives (Cuzick's Test) |
| cuzickTest.default | Testing against Ordered Alternatives (Cuzick's Test) |
| cuzickTest.formula | Testing against Ordered Alternatives (Cuzick's Test) |
-- D --
| default | Dunn's All-Pairs Rank Comparison Test |
| Dgrubbs | Grubbs D* distribution |
| doubleGrubbsTest | Grubbs Double Outlier Test |
| dscfAllPairsTest | Multiple Comparisons of Mean Rank Sums |
| dscfAllPairsTest.default | Multiple Comparisons of Mean Rank Sums |
| dscfAllPairsTest.formula | Multiple Comparisons of Mean Rank Sums |
| duncanTest | Duncan's Multiple Range Test |
| duncanTest.aov | Duncan's Multiple Range Test |
| duncanTest.default | Duncan's Multiple Range Test |
| duncanTest.formula | Duncan's Multiple Range Test |
| Dunnett | Dunnett Distribution |
| dunnettT3Test | Dunnett's T3 Test |
| dunnettT3Test.aov | Dunnett's T3 Test |
| dunnettT3Test.default | Dunnett's T3 Test |
| dunnettT3Test.formula | Dunnett's T3 Test |
| dunnettTest | Dunnett's Many-to-One Comparisons Test |
| dunnettTest.aov | Dunnett's Many-to-One Comparisons Test |
| dunnettTest.default | Dunnett's Many-to-One Comparisons Test |
| dunnettTest.formula | Dunnett's Many-to-One Comparisons Test |
| durbinAllPairsTest | All-Pairs Comparisons Test for Balanced Incomplete Block Designs |
| durbinAllPairsTest.default | All-Pairs Comparisons Test for Balanced Incomplete Block Designs |
| durbinTest | Durbin Test |
| durbinTest.default | Durbin Test |
-- F --
| flignerWolfeTest | Testing Several Treatments With One Control |
| flignerWolfeTest.default | Testing Several Treatments With One Control |
| flignerWolfeTest.formula | Testing Several Treatments With One Control |
| frdAllPairsConoverTest | Conover's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsConoverTest.default | Conover's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsExactTest | Exact All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsExactTest.default | Exact All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsMillerTest | Millers's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsMillerTest.default | Millers's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsNemenyiTest | Nemenyi's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsNemenyiTest.default | Nemenyi's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsNemenyiTest.formula | Nemenyi's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsSiegelTest | Siegel and Castellan's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdAllPairsSiegelTest.default | Siegel and Castellan's All-Pairs Comparisons Test for Unreplicated Blocked Data |
| frdHouseTest | House Test |
| frdHouseTest.default | House Test |
| frdManyOneDemsarTest | Demsar's Many-to-One Test for Unreplicated Blocked Data |
| frdManyOneDemsarTest.default | Demsar's Many-to-One Test for Unreplicated Blocked Data |
| frdManyOneExactTest | Exact Many-to-One Test for Unreplicated Blocked Data |
| frdManyOneExactTest.default | Exact Many-to-One Test for Unreplicated Blocked Data |
| frdManyOneNemenyiTest | Nemenyi's Many-to-One Test for Unreplicated Blocked Data |
| frdManyOneNemenyiTest.default | Nemenyi's Many-to-One Test for Unreplicated Blocked Data |
| friedmanTest | Friedman Rank Sum Test |
| friedmanTest.default | Friedman Rank Sum Test |
-- G --
| gamesHowellTest | Games-Howell Test |
| gamesHowellTest.aov | Games-Howell Test |
| gamesHowellTest.default | Games-Howell Test |
| gamesHowellTest.formula | Games-Howell Test |
| gesdTest | Generalized Extreme Studentized Deviate Many-Outlier Test |
| goreTest | Gore Test |
| Grubbs | Grubbs distribution |
| grubbsTest | Grubbs Outlier Test |
| GSTTest | Generalized Siegel-Tukey Test of Homogeneity of Scales |
| GSTTest.default | Generalized Siegel-Tukey Test of Homogeneity of Scales |
| GSTTest.formula | Generalized Siegel-Tukey Test of Homogeneity of Scales |
-- H --
| hartleyTest | Hartley's Maximum F-Ratio Test of Homogeneity of Variances |
| hartleyTest.default | Hartley's Maximum F-Ratio Test of Homogeneity of Variances |
| hartleyTest.formula | Hartley's Maximum F-Ratio Test of Homogeneity of Variances |
| hayterStoneTest | Hayter-Stone Test |
| hayterStoneTest.default | Hayter-Stone Test |
| hayterStoneTest.formula | Hayter-Stone Test |
| hsAllPairsTest | Hayter-Stone All-Pairs Comparison Test |
| hsAllPairsTest.default | Hayter-Stone All-Pairs Comparison Test |
| hsAllPairsTest.formula | Hayter-Stone All-Pairs Comparison Test |
-- J --
| johnsonTest | Testing against Ordered Alternatives (Johnson-Mehrotra Test) |
| johnsonTest.default | Testing against Ordered Alternatives (Johnson-Mehrotra Test) |
| johnsonTest.formula | Testing against Ordered Alternatives (Johnson-Mehrotra Test) |
| jonckheereTest | Testing against Ordered Alternatives (Jonckheere-Terpstra Test) |
| jonckheereTest.default | Testing against Ordered Alternatives (Jonckheere-Terpstra Test) |
| jonckheereTest.formula | Testing against Ordered Alternatives (Jonckheere-Terpstra Test) |
-- K --
| kruskalTest | Kruskal-Wallis Rank Sum Test |
| kruskalTest.default | Kruskal-Wallis Rank Sum Test |
| kruskalTest.formula | Kruskal-Wallis Rank Sum Test |
| kwAllPairsConoverTest | Conover's All-Pairs Rank Comparison Test |
| kwAllPairsConoverTest.default | Conover's All-Pairs Rank Comparison Test |
| kwAllPairsConoverTest.formula | Conover's All-Pairs Rank Comparison Test |
| kwAllPairsDunnTest | Dunn's All-Pairs Rank Comparison Test |
| kwAllPairsDunnTest.default | Dunn's All-Pairs Rank Comparison Test |
| kwAllPairsDunnTest.formula | Dunn's All-Pairs Rank Comparison Test |
| kwAllPairsNemenyiTest | Nemenyi's All-Pairs Rank Comparison Test |
| kwAllPairsNemenyiTest.default | Nemenyi's All-Pairs Rank Comparison Test |
| kwAllPairsNemenyiTest.formula | Nemenyi's All-Pairs Rank Comparison Test |
| kwManyOneConoverTest | Conover's Many-to-One Rank Comparison Test |
| kwManyOneConoverTest.default | Conover's Many-to-One Rank Comparison Test |
| kwManyOneConoverTest.formula | Conover's Many-to-One Rank Comparison Test |
| kwManyOneDunnTest | Dunn's Many-to-One Rank Comparison Test |
| kwManyOneDunnTest.default | Dunn's Many-to-One Rank Comparison Test |
| kwManyOneDunnTest.formula | Dunn's Many-to-One Rank Comparison Test |
| kwManyOneNdwTest | Nemenyi-Damico-Wolfe Many-to-One Rank Comparison Test |
| kwManyOneNdwTest.default | Nemenyi-Damico-Wolfe Many-to-One Rank Comparison Test |
| kwManyOneNdwTest.formula | Nemenyi-Damico-Wolfe Many-to-One Rank Comparison Test |
-- L --
| leTest | Testing against Ordered Alternatives (Le's Test) |
| leTest.default | Testing against Ordered Alternatives (Le's Test) |
| leTest.formula | Testing against Ordered Alternatives (Le's Test) |
| lsdTest | Least Significant Difference Test |
| lsdTest.aov | Least Significant Difference Test |
| lsdTest.default | Least Significant Difference Test |
| lsdTest.formula | Least Significant Difference Test |
-- M --
| mackWolfeTest | Mack-Wolfe Test for Umbrella Alternatives |
| mackWolfeTest.default | Mack-Wolfe Test for Umbrella Alternatives |
| mackWolfeTest.formula | Mack-Wolfe Test for Umbrella Alternatives |
| Mandel-h | Mandel's h Distribution |
| Mandel-k | Mandel's k Distribution |
| mandelhTest | Mandel's h Test According to E 691 ASTM |
| mandelhTest.default | Mandel's h Test According to E 691 ASTM |
| mandelhTest.formula | Mandel's h Test According to E 691 ASTM |
| mandelkTest | Mandel's k Test According to E 691 ASTM |
| mandelkTest.default | Mandel's k Test According to E 691 ASTM |
| mandelkTest.formula | Mandel's k Test According to E 691 ASTM |
| manyOneUTest | Multiple Comparisons with One Control (U-test) |
| manyOneUTest.default | Multiple Comparisons with One Control (U-test) |
| manyOneUTest.formula | Multiple Comparisons with One Control (U-test) |
| mrrTest | Madhava Rao-Raghunath Test for Testing Treatment vs. Control |
| mrrTest.default | Madhava Rao-Raghunath Test for Testing Treatment vs. Control |
| mrrTest.formula | Madhava Rao-Raghunath Test for Testing Treatment vs. Control |
| MTest | Extended One-Sided Studentised Range Test |
| MTest.aov | Extended One-Sided Studentised Range Test |
| MTest.default | Extended One-Sided Studentised Range Test |
| MTest.formula | Extended One-Sided Studentised Range Test |
-- N --
| normalScoresAllPairsTest | Lu-Smith All-Pairs Comparison Normal Scores Test |
| normalScoresAllPairsTest.default | Lu-Smith All-Pairs Comparison Normal Scores Test |
| normalScoresAllPairsTest.formula | Lu-Smith All-Pairs Comparison Normal Scores Test |
| normalScoresManyOneTest | Lu-Smith Many-One Comparisons Normal Scores Test |
| normalScoresManyOneTest.default | Lu-Smith Many-One Comparisons Normal Scores Test |
| normalScoresManyOneTest.formula | Lu-Smith Many-One Comparisons Normal Scores Test |
| normalScoresTest | Lu-Smith Normal Scores Test |
| normalScoresTest.default | Lu-Smith Normal Scores Test |
| normalScoresTest.formula | Lu-Smith Normal Scores Test |
| NPMTest | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
| NPMTest.default | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
| NPMTest.formula | All-Pairs Comparisons for Simply Ordered Mean Ranksums |
-- O --
| osrtTest | One-Sided Studentized Range Test |
| osrtTest.aov | One-Sided Studentized Range Test |
| osrtTest.default | One-Sided Studentized Range Test |
| osrtTest.formula | One-Sided Studentized Range Test |
-- P --
| pageTest | Page Rank Sum Test |
| pageTest.default | Page Rank Sum Test |
| pcochran | Cochran's distribution |
| pdgrubbs | Grubbs D* distribution |
| pDunnett | Dunnett Distribution |
| Pentosan | Pentosan Dataset |
| pgrubbs | Grubbs distribution |
| plot.mandel | Plotting mandel Objects |
| plot.PMCMR | Plotting PMCMR Objects |
| pmandelh | Mandel's h Distribution |
| pmandelk | Mandel's k Distribution |
| power.dunnett.test | Power Calculations for Balanced Dunnett's Many-to-One Comparison Test |
| power.tukey.test | Power Calculations for Balanced Tukey's Multiple Comparison Test |
| power.williams.test | Power calculations for minimum detectable difference of the Williams' test |
| powerMCTests | Power Simulation for One-Factorial All-Pairs and Many-To-One Comparison Tests |
| powerOneWayTests | Power Simulation for One-Factorial Single Hypothesis Tests |
| Mandel Printing | |
| print.gesdTest | gesdTest Printing |
| print.mandel | Mandel Printing |
| print.osrt | osrt Printing |
| print.PMCMR | PMCMR Printing |
| print.powerOneWayPMCMR | PowerOneWayPMCMR Printing |
| print.powerPMCMR | PowerPMCMR Printing |
| print.trendPMCMR | trendPMCMR Printing |
-- Q --
| qcochran | Cochran's distribution |
| qDunnett | Dunnett Distribution |
| qgrubbs | Grubbs distribution |
| qmandelh | Mandel's h Distribution |
| qmandelk | Mandel's k Distribution |
| qPCR | qPCR Curve Analysis Methods |
| quadeAllPairsTest | All-Pairs Comparisons for Unreplicated Blocked Data (Quade's All-Pairs Test) |
| quadeAllPairsTest.default | All-Pairs Comparisons for Unreplicated Blocked Data (Quade's All-Pairs Test) |
-- R --
| reviewers | Reviewers |
-- S --
| scheffeTest | Scheffe's Test |
| scheffeTest.aov | Scheffe's Test |
| scheffeTest.default | Scheffe's Test |
| scheffeTest.formula | Scheffe's Test |
| shanTest | Testing against Ordered Alternatives (Shan-Young-Kang Test) |
| shanTest.default | Testing against Ordered Alternatives (Shan-Young-Kang Test) |
| shanTest.formula | Testing against Ordered Alternatives (Shan-Young-Kang Test) |
| shirleyWilliamsTest | Shirley-Williams Test |
| shirleyWilliamsTest.default | Shirley-Williams Test |
| shirleyWilliamsTest.formula | Shirley-Williams Test |
| siegelTukeyTest | Siegel-Tukey Rank Dispersion Test |
| siegelTukeyTest.default | Siegel-Tukey Rank Dispersion Test |
| siegelTukeyTest.formula | Siegel-Tukey Rank Dispersion Test |
| skillingsMackTest | Skillings-Mack Test |
| skillingsMackTest.default | Skillings-Mack Test |
| snkTest | Student-Newman-Keuls Test |
| snkTest.aov | Student-Newman-Keuls Test |
| snkTest.default | Student-Newman-Keuls Test |
| snkTest.formula | Student-Newman-Keuls Test |
| spearmanTest | Testing against Ordered Alternatives (Spearman Test) |
| spearmanTest.default | Testing against Ordered Alternatives (Spearman Test) |
| spearmanTest.formula | Testing against Ordered Alternatives (Spearman Test) |
| steelsKSampleTest | Steel's k-Treatments vs. Control Test |
| steelsKSampleTest.default | Steel's k-Treatments vs. Control Test |
| steelsKSampleTest.formula | Steel's k-Treatments vs. Control Test |
| steelTest | Steel's Many-to-One Rank Test |
| steelTest.default | Steel's Many-to-One Rank Test |
| steelTest.formula | Steel's Many-to-One Rank Test |
| stepDownTrendTest | Step Down Trend Tests |
| stepDownTrendTest.default | Step Down Trend Tests |
| stepDownTrendTest.formula | Step Down Trend Tests |
| summary.gesdTest | Summarize an gesdTest Object |
| summary.mandel | Object Summary for class '"mandel"' |
| summary.osrt | Summarize an osrt Object |
| summary.PMCMR | Summarize an PMCMR Object |
| summary.trendPMCMR | Summarize an trendPMCMR Object |
| summaryGroup | Grouped Summary of an PMCMR Object |
-- T --
| tamhaneDunnettTest | Tamhane-Dunnett Many-to-One Comparison Test |
| tamhaneDunnettTest.aov | Tamhane-Dunnett Many-to-One Comparison Test |
| tamhaneDunnettTest.default | Tamhane-Dunnett Many-to-One Comparison Test |
| tamhaneDunnettTest.formula | Tamhane-Dunnett Many-to-One Comparison Test |
| tamhaneT2Test | Tamhane's T2 Test |
| tamhaneT2Test.aov | Tamhane's T2 Test |
| tamhaneT2Test.default | Tamhane's T2 Test |
| tamhaneT2Test.formula | Tamhane's T2 Test |
| toTidy | Convert a PMCMR or osrt Object to a Data.Frame |
| trout | Data from a Dose-Response Experiment with Trouts |
| tukeyTest | Tukey's Multiple Comparison Test |
| tukeyTest.aov | Tukey's Multiple Comparison Test |
| tukeyTest.default | Tukey's Multiple Comparison Test |
| tukeyTest.formula | Tukey's Multiple Comparison Test |
-- U --
| uryWigginsHochbergTest | Ury, Wiggins, Hochberg Test |
| uryWigginsHochbergTest.aov | Ury, Wiggins, Hochberg Test |
| uryWigginsHochbergTest.default | Ury, Wiggins, Hochberg Test |
| uryWigginsHochbergTest.formula | Ury, Wiggins, Hochberg Test |
-- V --
| vanWaerdenAllPairsTest | van-der-Waerden's All-Pairs Comparison Normal Scores Test |
| vanWaerdenAllPairsTest.default | van-der-Waerden's All-Pairs Comparison Normal Scores Test |
| vanWaerdenAllPairsTest.formula | van-der-Waerden's All-Pairs Comparison Normal Scores Test |
| vanWaerdenManyOneTest | van-der-Waerden's Many-One Comparisons Normal Scores Test |
| vanWaerdenManyOneTest.default | van-der-Waerden's Many-One Comparisons Normal Scores Test |
| vanWaerdenManyOneTest.formula | van-der-Waerden's Many-One Comparisons Normal Scores Test |
| vanWaerdenTest | van der Waerden's Normal Scores Test |
| vanWaerdenTest.default | van der Waerden's Normal Scores Test |
| vanWaerdenTest.formula | van der Waerden's Normal Scores Test |
| vanWeardenTest.default | van der Waerden's Normal Scores Test |
-- W --
| welchManyOneTTest | Welchs's Many-To-One Comparison Test |
| welchManyOneTTest.aov | Welchs's Many-To-One Comparison Test |
| welchManyOneTTest.default | Welchs's Many-To-One Comparison Test |
| welchManyOneTTest.formula | Welchs's Many-To-One Comparison Test |
| williamsTest | Williams Trend Test |
| williamsTest.aov | Williams Trend Test |
| williamsTest.default | Williams Trend Test |
| williamsTest.formula | Williams Trend Test |