plexi_distance_test1_isn {PLEXI}

Test the extremeness of embedding distances of local neighbors.

Description

Test the extremeness of embedding distances of local neighbors.

Usage

plexi_distance_test1_isn(distance, p.adjust.method = "none")

Arguments

distance

a distance list obtained by the plexi_node_distance() function.

p.adjust.method

method for adjusting p-value (including methods on p.adjust.methods). If set to "none" (default), no adjustment will be performed.

Details

The adjusted p-values for each node is calculated based on their distance.

Value

The adjusted pvalues for each node.

Examples

ISN1 = network_gen(n.nodes = 50, n.var.nodes = 5, n.var.nei = 40, noise.sd = .01)
ISN2 = network_gen(n.nodes = 50, n.var.nodes = 5, n.var.nei = 40, noise.sd = .01)
graph_data = cbind(ISN1[["data_graph"]], ISN1[["data_graph"]][,3:4])
embeddingSpaceList = plexi_embedding(graph.data=graph_data, outcome=c(1,2,1,2),
indv.index=c(1,1,2,2), train.rep=2, random.walk=FALSE)
Dist = plexi_node_distance(embeddingSpaceList)
Result = plexi_distance_test1_isn(Dist)