Discover Probable Duplicates in Plant Genetic Resources Collections

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Documentation for package ‘PGRdup’ version 0.2.3.9

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

PGRdup-package	The PGRdup Package
AddProbDup	Add probable duplicate sets fields to the PGR passport database
DataClean	Clean PGR passport data
DisProbDup	Get disjoint probable duplicate sets
DoubleMetaphone	'Double Metaphone' phonetic algorithm
GN1000	Sample groundnut PGR passport data
KWCounts	Generate keyword counts
KWIC	Create a KWIC index
MergeKW	Merge keyword strings
MergePrefix	Merge keyword strings
MergeProbDup	Merge two objects of class 'ProbDup'
MergeSuffix	Merge keyword strings
ParseProbDup	Parse an object of class 'ProbDup' to a data frame.
PGRdup	The PGRdup Package
print.KWIC	Prints summary of 'KWIC' object.
print.ProbDup	Prints summary of 'ProbDup' object.
ProbDup	Identify probable duplicates of accessions
read.genesys	Convert 'Darwin Core - Germplasm' zip archive to a flat file
ReconstructProbDup	Reconstruct an object of class ProbDup
ReviewProbDup	Retrieve probable duplicate set information from PGR passport database for review
SplitProbDup	Split an object of class 'ProbDup'
ValidatePrimKey	Validate if a data frame column confirms to primary key/ID constraints
ViewProbDup	Visualize the probable duplicate sets retrieved in a 'ProbDup' object