Phylogeographic Analysis of Island Colonization Events

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Documentation for package ‘PAICE’ version 1.0.1

• DESCRIPTION file.

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PAICE-package	Phylogeographic Analysis of Island Colonization Events
.onAttach	.onAttach start message
CmonsData	Occurrence matrix of _Cistus monspeliensis_ in the Canary Islands
CmonsNetwork	Genealogical relationship of _Cistus monspeliensis_ haplotypes
CmonsRare	Simulated rarefaction curves of _Cistus monspeliensis_
colonization	Inference of minimum number of colonization events
geneticResampling	Simulate genetic sampling effort reduction
maxCol	Asymptotic estimation of the number of colonization events
PAICE	Phylogeographic Analysis of Island Colonization Events
plot.maxCol	Plot asymptotic estimators of colonization events
plot.rarecol	Plot rarefaction curve of colonization events
rarecol	Rarefaction curve of colonization events
read.rarecol	Read files containing rarefaction curves of colonization events