fHeip {OnomasticDiversity} | R Documentation |
Calculate the Heip's diversity index
Description
This function obtains the Heip's diversity index introduced by Carlo H. R. Heip. It is a method for quantifying species biodiversity that can be adapted to the context of onomastic.
Usage
fHeip (x, k, n, location, s)
Arguments
x |
dataframe of the data values for each species not null (because if you have a sample, there might be species that are not represented). |
k |
name of a variable which represents absolute frequency for each species. |
n |
name of a variable which represents total number of individuals. |
location |
represents the grouping element. |
s |
vector which represents total number of species. |
Details
For a community i
, the Heip's diversity index is defined by
E_{He} = \frac{2^{H^{\prime}}-1}{S_i-1}
where H^{\prime}
is the Shannon diversity index and S_i
are all species at the community, species richness. This index varies from 0 to 1 and measures how equally the species richness contributes to the total abundance of the community.
In onomastic context, S_i
are all surnames in region (\approx
community diversity context) i
.
Value
A dataframe containing the following components:
location |
represents the grouping element, for example the communities / regions. |
heip |
the value of the Heip's diversity index. |
Author(s)
Maria Jose Ginzo Villamayor
References
Heip, C. (1974). A New Index Measuring Evenness. Journal of the Marine Biological Association of the United Kingdom, 54(3), 555–557.
See Also
fMargalef
,
fMenhinick
,
fPielou
,
fShannon
,
fSheldon
,
fSimpson
,
fSimpsonInf
,
fGeneralisedMean
, fGeometricMean
.
Examples
library(sqldf)
data(surnamesgal14)
loc <- length(unique(surnamesgal14$muni))
apes2=sqldf('select muni, count(surname) as ni,
sum(number) as population from surnamesgal14
group by muni;')
result = fHeip (x= surnamesgal14[surnamesgal14$number != 0,],
k="number", n="population", location = "muni",
s = apes2$ni[1:loc] )
result
data(namesmengal16)
loc <- length(unique(namesmengal16$muni))
names2=sqldf('select muni, count(name) as ni,
sum(number) as population from namesmengal16
group by muni;')
result = fHeip (x= namesmengal16[namesmengal16$number != 0,],
k="number", n="population", location = "muni",
s = names2$ni[1:loc] )
result
data(nameswomengal16)
loc <- length(unique(nameswomengal16$muni))
names2=sqldf('select muni, count(name) as ni,
sum(number) as population from nameswomengal16
group by muni;')
result = fHeip (x= nameswomengal16[nameswomengal16$number != 0,],
k="number", n="population", location = "muni",
s = names2$ni[1:loc] )
result