herbIngredient {NIMAA}

herbIngredient

Description

The second version of the TCMID database was used as one of the large datasets in the TCM herb field. TCMID includes additional ingredient-specific experimental data based on herbal mass spectrometry spectra. The herb and ingredient associations from this database are provided here.

Usage

herbIngredient

Format

A tibble with two variables:

herb

Scientific Latin names of available herbs in TCM database

pubchem_id

unique compound id (CID) of ingredients based on PubChem database for available herb in TCMID database

Source

Huang, L., Xie, D., Yu, Y., Liu, H., Shi, Y., Shi, T., & Wen, C. (2018). TCMID 2.0: a comprehensive resource for TCM. Nucleic acids research, 46(D1), D1117–D1120. https://academic.oup.com/nar/article/46/D1/D1117/4584630