cenCompareQQ {NADA2}

Censored Q-Q Plot comparison

Description

Produces three quantile-quantile (Q-Q) plots, also called probability plots, based on three distributions (normal, lognormal and gamma distributions).

Usage

cenCompareQQ(x.var, cens.var, Yname = yname, printrslt = TRUE, ...)

Arguments

x.var

The column of x (response variable) values plus detection limits

cens.var

The column of indicators, where 1 (or TRUE) indicates a detection limit in the y.var column, and 0 (or FALSE) indicates a detected value in y.var.

Yname

Optional – input text in quotes to be used as the variable name on all plots. The default Yname is the name of the y.var input variable.

printrslt

Logical TRUE/FALSE option of whether to print the best distribution in the console window, or not. Default is TRUE.

...

further graphical parameters (from par), such as srt, family and xpd.

Details

Produces three Q-Q plots and reports which one has the highest Shapiro-Francia test statistic (W). The distribution with the highest W is the best fit of the three.

Value

Plots three Q-Q plots based on normal, lognormal and gamma distributions and prints the best-fit distribution.

References

Helsel, D.R., 2011. Statistics for censored environmental data using Minitab and R, 2nd ed. John Wiley & Sons, USA, N.J.

Millard, S.P., 2013. EnvStats: An R Package for Environmental Statistics. Springer-Verlag, New York.

Shapiro, S.S., Francia, R.S., 1972. An approximate analysis of variance test for normality. Journal of the American Statistical Association 67, 215–216.

Examples

data(Brumbaugh)
cenCompareQQ(Brumbaugh$Hg,Brumbaugh$HgCen)