GetRA {MicrobiomeSurv}

This function convert OTU matrix to RA matrix.

Description

This function convert OTU matrix to RA matrix.

Usage

GetRA(Micro.mat)

Arguments

Micro.mat

an OTU matrix with OTUs in rows and subjects in columns.

Value

A relative abundance matrix of OTUs

ra

Relative abundance matrixs

Author(s)

Thi Huyen Nguyen, [e-mail]

Olajumoke Evangelina Owokotomo, [e-mail]

Ziv Shkedy

See Also

GetRA

Examples

# Read dataset
data(Week3_otu)
Week3_otu = data.frame(Week3_otu)
otu_mat_w3 = t(data.matrix(Week3_otu[ , 1:2720]))

# Convert absolute abundance to relative abundance
ra_otu_trim_w3 = GetRA(Micro.mat = otu_mat_w3)