PlotHeatMap {MiRSEA} | R Documentation |
Plot a heat map
Description
Plot a heat map for a microRNA(miRNA) set which co-regulate pathway
Usage
PlotHeatMap(miRlist,input.ds,input.cls)
Arguments
miRlist |
A list of miRNA LIST result obtained from the MsReport function |
input.ds |
Input miRNA expression Affymetrix dataset file in GCT format |
input.cls |
Input class vector (phenotype) file in CLS format |
Details
Plots a heatmap of a miRNA set in the expression matrix including phenotype vector and miRNA, sample and phenotype labels
Author(s)
Junwei Hanhanjunwei1981@163.com,Siyao Liu liusiyao29@163.com
See Also
Examples
## Not run:
#get example data
#input.ds <- readLines("F:/lsy/xin data/GSE36915.gct")
#input.cls <- readLines("F:/lsy/xin data/GSE36915.cls")
input.ds <- GetExampleData("dataset")
input.cls <- GetExampleData("class.labels")
#get a list of miRNA list result
miRlist<-GetExampleData("miRList")
#Plot a heat map
PlotHeatMap(miRlist,input.ds,input.cls)
## End(Not run)
[Package MiRSEA version 1.1.1 Index]