GetPathwayData {MiRSEA}R Documentation

Get the gene sets of pathways

Description

Get the gene sets of pathways for the three pathway databases (KEGG; Biocarta; Reactome)

Usage

 GetPathwayData(pathway)

Arguments

pathway

choose database of pathway,"kegg","biocarta" or"reactome"

Details

The gene sets of pathways for the three pathway database (KEGG; Biocarta; Reactome)are obtained from the environment variable envData.

Author(s)

Junwei Hanhanjunwei1981@163.com,Siyao Liu liusiyao29@163.com

Examples

## Not run: 

#obtain the gene sets of  kegg pathways.
pathway<-GetPathwayData("kegg")



## End(Not run)


[Package MiRSEA version 1.1.1 Index]