summaryROCPlot {MetaIntegrator} | R Documentation |
Generate a plot with a summary ROC curve
Description
Generate a plot with a summary ROC curve
Usage
summaryROCPlot(metaObject, filterObject, bootstrapReps = 500,
orderByAUC = TRUE, alphaBetaPlots = TRUE)
Arguments
metaObject |
a Meta object which must have the $originalData populated |
filterObject |
a MetaFilter object containing the signature genes that will be used for calculating the score |
bootstrapReps |
number of bootstrap simulations to run for confidence interval on summary ROC |
orderByAUC |
if TRUE, then order legend by summary AUC. Otherwise, use default ordering. |
alphaBetaPlots |
if TRUE, then draw forest plots of alpha and beta. If false, suppress plotting. |
Value
Generates a ROC plot for all datasets
Author(s)
Timothy E. Sweeney
Examples
## Not run:
summaryROCPlot(tinyMetaObject,filterObject =
tinyMetaObject$filterResults$pValueFDR0.05_es0_nStudies1_looaTRUE_hetero0)
## End(Not run)
[Package MetaIntegrator version 2.1.3 Index]