MangrovePed {Mangrove} | R Documentation |
The MangrovePed class
Description
Functions to read in and summarise MangrovePed objects
Usage
readPed(prefix)
## S3 method for class 'MangrovePed'
summary(object, ...)
## S3 method for class 'MangrovePed'
print(x, ...)
## S3 method for class 'MangrovePed'
plot(x, ...)
Arguments
prefix |
The prefix for the file locations of a pair pedigree and map files, such as produced by the program |
x |
An object of class |
object |
An object of class |
... |
Arguments to be passed on to other methods. |
Details
A MangrovePed object holds genotypes and family relationships for a number of individuals. You can read in such data from a Plink pedigree file using readPed
.
You can show the raw pedigree data using the print
method and get summary information (such as number of samples, cases and variants) using the summary
method. The plot
function produces an error.
Value
For readPed
, an object of class MangrovePed
. For methods, nothing is returned.
See Also
Examples
data(famped)
summary(famped)
print(famped)