Mangrove-package |
Mangrove: Risk prediction on trees |
addPed |
The MangroveTree class |
applyBetas |
The MangroveContPreds class |
applyORs |
The MangroveRiskPreds class |
calcBetas |
The MangroveContPreds class |
calcORs |
The MangroveRiskPreds class |
ccped |
Example data for the Mangrove vignette |
contped |
Example data for the Mangrove vignette |
exampleBetas |
Example data for the Mangrove vignette |
exampleORs |
Example data for the Mangrove vignette |
famped |
Example data for the Mangrove vignette |
getPrevs |
The MangroveTree class |
getVarExp |
Calculating liability-scale variance explained by genetic risk variants |
getVarExpSim |
Calculating liability-scale variance explained by genetic risk variants |
initialiseTree |
The MangroveTree class |
Mangrove |
Mangrove: Risk prediction on trees |
MangroveBetas |
The MangroveBetas class |
MangroveContPreds |
The MangroveContPreds class |
MangroveExamples |
Example data for the Mangrove vignette |
MangroveORs |
The MangroveORs class |
MangrovePed |
The MangrovePed class |
MangroveRiskPreds |
The MangroveRiskPreds class |
MangroveSample |
The MangroveSample class |
MangroveTree |
The MangroveTree class |
plot.MangroveBetas |
The MangroveBetas class |
plot.MangroveContPreds |
The MangroveContPreds class |
plot.MangroveORs |
The MangroveORs class |
plot.MangrovePed |
The MangrovePed class |
plot.MangroveRiskPreds |
The MangroveRiskPreds class |
plot.MangroveSample |
The MangroveSample class |
plot.MangroveTree |
The MangroveTree class |
plotNaivePrev |
Plotting expected |
plotSampledPrev |
Plotting expected |
print.MangroveBetas |
The MangroveBetas class |
print.MangroveContPreds |
The MangroveContPreds class |
print.MangroveORs |
The MangroveORs class |
print.MangrovePed |
The MangrovePed class |
print.MangroveRiskPreds |
The MangroveRiskPreds class |
print.MangroveSample |
The MangroveSample class |
print.MangroveTree |
The MangroveTree class |
readBetas |
The MangroveBetas class |
readORs |
The MangroveORs class |
readPed |
The MangrovePed class |
summary.MangroveBetas |
The MangroveBetas class |
summary.MangroveContPreds |
The MangroveContPreds class |
summary.MangroveORs |
The MangroveORs class |
summary.MangrovePed |
The MangrovePed class |
summary.MangroveRiskPreds |
The MangroveRiskPreds class |
summary.MangroveSample |
The MangroveSample class |
summary.MangroveTree |
The MangroveTree class |