pTableYeastRokas {MSCquartets}

pTable for Yeast dataset

Description

An .rda file dataset for the "dataYeastRokas" dataset. This is a subset of the data of Rokas et al. (2003).

Usage

data(pTableYeastRokas)

Format

an R data file

Details

This is provided primarily so that examples of other functions run more quickly. It can be reproduced by the following example code below.

Source

https://wiki.rice.edu/confluence/download/attachments/8898533/yeast.trees?version=1&modificationDate=1360603275797&api=v2

References

Rokas A, Williams B, Carrol S (2003). “Genome-scale approaches to resolving incongruence in molecular phylogenies.” Nature, 425, 798–804.

Examples

gtrees=read.tree(file = system.file("extdata","dataYeastRokas",package="MSCquartets"))
QT=quartetTable(gtrees)
RQT=quartetTableResolved(QT)
pTable=quartetCutTestInd(RQT)
pTable=quartetTreeTestInd(pTable)
pTableYeastRokas=quartetStarTestInd(pTable)