Omics Data Analysis

---

Documentation for package ‘MKomics’ version 0.7

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

MKomics-package	Omics Data Analysis.
corDist	Correlation Distance Matrix Computation
corPlot	Plot of similarity matrix based on correlation
corPlot2	Plot of similarity matrix based on correlation
heatmapCol	Generate colors for heatmaps
madMatrix	Compute MAD between colums of a matrix or data.frame
madPlot	Plot of similarity matrix based on MAD
madPlot2	Plot of similarity matrix based on MAD
MKomics	Omics Data Analysis.
mod.oneway.test	Moderated 1-Way ANOVA
mod.t.test	Moderated t-Test
oneWayAnova	A function for Analysis of Variance
pairwise.fc	Compute pairwise fold changes
pairwise.logfc	Compute pairwise log-fold changes
pairwise.mod.t.test	Pairwise Moderated t-Tests
repMeans	Compute mean of replicated spots
simPlot	Plot of a similarity matrix.
simPlot2	Plot of a similarity matrix.
stringDist	Function to compute distances between strings
stringSim	Function to compute similarity scores between strings
traceBack	Function to trace back
twoWayAnova	A function for Analysis of Variance