adhocGene.DE.Gene.10x {MARVEL} | R Documentation |
Differential gene expression analysis of specified gene
Description
Performs differential gene expression analysis specified gene across for all possible pairs of cell groups. The gene and cell groups were defined earlier in adhocGene.TabulateExpression.Gene.10x
function.
Usage
adhocGene.DE.Gene.10x(MarvelObject)
Arguments
MarvelObject |
Marvel object. S3 object generated from |
Value
An object of class S3 with new slots MarvelObject$adhocGene$DE$Gene$Data
.
Examples
marvel.demo.10x <- readRDS(system.file("extdata/data",
"marvel.demo.10x.rds",
package="MARVEL")
)
marvel.demo.10x <- adhocGene.DE.Gene.10x(MarvelObject=marvel.demo.10x)
# Check output
marvel.demo.10x$adhocGene$DE$Gene$Data
[Package MARVEL version 1.4.0 Index]