summary.scSpectra {MALDIrppa} | R Documentation |
Numerical summary of screenSpectra
objects
Description
This is a summary
method for scSpectra
objects that generates a numerical summary of the settings and results from applying screenSpectra
to identify potential faulty, low-quality raw mass spectra.
Usage
## S3 method for class 'scSpectra'
summary(object, ncases = 10, ...)
Arguments
object |
A |
ncases |
Number of cases shown in the results table. |
... |
Other arguments. |
Details
A table is generated that includes details of the numerical estimations along with mass spectra ID, A score and the label for each mass spectra, either potentially low-quality (failure
) or good-quality (success
).
Value
No return value, text printed on console.
See Also
See screenSpectra
and plot.scSpectra
.
Examples
# Load example data
data(spectra) # list of MassSpectra objects
sc.results <- screenSpectra(spectra)
summary(sc.results)
[Package MALDIrppa version 1.1.0-2 Index]