CalculatePrincipalCoordinates {MAGNAMWAR}

Show Principal Components Breakdown

Description

Function to show Principal Components statistics based on the OrthoMCL presence absence groupings.

Usage

CalculatePrincipalCoordinates(mcl_data)

Arguments

mcl_data

output of FormatAfterOrtho –list of 2 things– 1: binary matrix indicating the presence / absence of genes in each OG and 2: vector of names of OGs

Value

returns a named list of principal components and accompanying proportion of variance for each

Examples

CalculatePrincipalCoordinates(after_ortho_format)