get_consensus_taxonomy {LocaTT} | R Documentation |
Get Consensus Taxonomy from Taxonomic Strings
Description
Gets the consensus taxonomy from a vector of taxonomic strings.
Usage
get_consensus_taxonomy(taxonomies, full_names = TRUE, delimiter = ";")
Arguments
taxonomies |
A character vector of taxonomic strings. |
full_names |
Logical. If |
delimiter |
A character string of the delimiter between taxonomic levels in the input taxonomies. The default is |
Value
A character string containing the taxonomy agreed upon by all input taxonomies. If the input taxonomies are not the same at any taxonomic level, then NA
is returned.
Examples
get_consensus_taxonomy(taxonomies=
c("Eukaryota;Chordata;Amphibia;Caudata;Ambystomatidae;Ambystoma;Ambystoma_mavortium",
"Eukaryota;Chordata;Amphibia;Anura;Bufonidae;Anaxyrus;Anaxyrus_boreas",
"Eukaryota;Chordata;Amphibia;Anura;Ranidae;Rana;Rana_luteiventris"),
full_names=TRUE,
delimiter=";")
[Package LocaTT version 1.1.1 Index]