demo_SS.seq {LncFinder}

A demo of secondary structure sequences

Description

This file contains 10 SS (Secondary Structure) sequences.

Usage

data(demo_SS.seq)

Format

A data frame with 3 rows and 10 variables:

The first row is RNA sequence; the second row is Dot-Bracket Notation of secondary structure sequences; the last row is minimum free energy (MFE).

Source

DNA sequences are selected from GENCODE. Secondary structure of each sequence is obtained from program "RNAfold".