Repeated Measurement Models for Discrete Times

Documentation for package ‘LMMstar’ version 1.0.1

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LMMstar package: repeated measurement models for discrete times

-- A --

abetaL	Data From The Bland Altman Study (Long Format)
abetaW	Data From The abeta Study (Wide Format)
add	Add Columns to Output
anova.lmm	Multivariate Tests For Linear Mixed Model
autoplot.lmm	Graphical Display For Linear Mixed Models
autoplot.partialCor	Graphical Display For Partial Correlation
autoplot.profile_lmm	Graphical Display of Profile Likelihood
autoplot.residuals_lmm	Graphical Display of the Residuals
autoplot.summarize	Graphical Display of the Descriptive Statistics
autoplot.summarizeNA	Graphical Display of Missing Data Pattern
autoplot.Wald_lmm	Graphical Display For Linear Hypothesis Test

-- B --

baselineAdjustment	Perform Baseline Adjustment
blandAltmanL	Data From The Bland Altman Study (Long Format)
blandAltmanW	Data From The Bland Altman Study (Wide Format)
bloodpressureL	Data From The Blood Pressure Study (Long Format)

-- C --

calciumL	Data From The Calcium Supplements Study (Long Format)
calciumW	Data From The Calcium Supplements Study (Wide Format)
ckdL	CKD long
ckdW	CKD wide
coef.lmm	Extract Coefficients From a Linear Mixed Model
coef.mlmm	Extract Coefficients From a Linear Mixed Model
confint.lmm	Statistical Inference for Linear Mixed Model
confint.mlmm	Confidence Intervals for Multiple Linear Mixed Model.
confint.Wald_lmm	Confidence Intervals for Multivariate Wald Tests
CS	Compound Symmetry Structure
CUSTOM	Custom Structure

-- D --

df.residual.lmm	Residuals Degrees of Freedom
dummy.coef.lmm	Marginal Mean Values For Linear Mixed Model

-- E --

emm_basis.lmm	Link to emmeans package
estfun.lmm	Extract the Score Function for Multcomp
estimate.lmm	Delta Method for Mixed Models

-- F --

Predicted Mean Value For Linear Mixed Model

-- G --

gastricbypassL	Data From The Gastric Bypass Study (Long Format)
gastricbypassW	Data From The Gastric Bypass Study (Wide Format)

-- I --

ID	identity Structure
iid.lmm	Extract the Influence Function From a Linear Mixed Model
IND	Independence Structure
information.lmm	Extract The Information From a Linear Mixed Model

-- L --

levels.lmm	Contrasts and Reference Level
lmm	Fit Linear Mixed Model
lmmCC	Fit Linear Mixed Model on Complete Case data
lmmCC.formula	Fit Linear Mixed Model on Complete Case data
lmmCC.lm	Fit Linear Mixed Model on Complete Case data
LMMstar.options	Global options for LMMstar package
logLik.lmm	Extract The Log-Likelihood From a Linear Mixed Model

-- M --

manifest.lmm	Variables Involved in a Linear Mixed Model
mlmm	Fit Multiple Linear Mixed Model
model.tables.lmm	Statistical Inference for Linear Mixed Model
mt.test	Multiple Student's t-Test

-- N --

ncgsL	Data From National Cooperative Gallstone Study (Long Format)
ncgsW	Data From National Cooperative Gallstone Study (Wide Format)

-- P --

partialCor	Partial Correlation
partialCor.formula	Partial Correlation
partialCor.list	Partial Correlation
partialCor.lmm	Partial Correlation
plot.lmm	Graphical Display For Linear Mixed Models
plot.partialCor	Graphical Display For Partial Correlation
plot.profile_lmm	Graphical Display of Profile Likelihood
plot.residuals_lmm	Graphical Display of the Residuals
plot.summarize	Graphical Display of the Descriptive Statistics
plot.summarizeNA	Graphical Display of Missing Data Pattern
plot.Wald_lmm	Graphical Display For Linear Hypothesis Test
potassiumRepeatedL	Data From The Potassium Intake Study (Long Format with intermediate measurements)
potassiumSingleL	Data From The Potassium Intake Study (Long Format)
potassiumSingleW	Data From The Potassium Intake Study (Wide Format)
predict.lmm	Predicted Mean Value With Uncertainty For Linear Mixed Model
profile.lmm	Evaluate Contour of the Log-Likelihood
proportion	Proportion of Significant Findings

-- R --

ranef.lmm	Estimate Random Effect From a Linear Mixed Model
rbind.Wald_lmm	Linear Hypothesis Testing Across Linear Mixed Models
RE	Random Effect Structure
recover_data.lmm	Link to emmeans package
remove	Remove Columns from Output
resample	Inference via Resampling for Linear Mixed Model
resample.lmm	Inference via Resampling for Linear Mixed Model
residuals	Extract The Residuals From a Linear Mixed Model
residuals.clmm	Extract The Residuals From a Linear Mixed Model
residuals.lmm	Extract The Residuals From a Linear Mixed Model
residuals.mlmm	Extract The Residuals From a Linear Mixed Model

-- S --

sampleRem	Sample Longuitudinal Data
scatterplot	Scatterplot for Continuous Variables
schoolL	Simulated Data with 3-level struture (Long Format)
score.lmm	Extract The Score From a Linear Mixed Model
sigma.lmm	Extract The Residuals Variance-Covariance Matrix From a Linear Mixed Model
summarize	Compute summary statistics
summarizeNA	Summarize missing data patterns
summary.lmm	Summary Output for a Linear Mixed Model
summary.mlmm	Summary of Multiple Linear Mixed Models
summary.partialCor	Summary for partial correlation
summary.Wald_lmm	Summary of Testing for a Linear Mixed Models
swabsL	Data From The SWABS Study (Long Format)
swabsW	Data From The SWABS Study (Wide Format)

-- T --

terms.lmm	Model Terms For Linear Mixed Models
TOEPLITZ	Toeplitz Structure

-- U --

UN	Unstructured Structure

-- V --

vasscoresL	Data From The VAS Study (Long Format)
vasscoresW	Data From The VAS Study (Wide Format)
vcov.lmm	Extract The Variance-Covariance Matrix From a Linear Mixed Model
vitaminL	Data From The Vitamin Study (Long Format)
vitaminW	Data From The Vitamin Study (Wide Format)

-- W --

Extract Weights Used to Pool Estimates