oligoMeta {IgAScores}

Metadata for the OligoMM12-Colitis experiment used as an example in the IgAScores package

Description

Metadata associated with the oligoSpecies data set.

Usage

data(oligoMeta)

Format

An object of class "tibble".

Details

Metadata for an experiment where mice with a defined gut microbiota (OligoMM12) were either given *Helicobacter hepaticus* and IL10R antibody or the antibody alone (the first developing colitis). These data accompany the species level counts in oligoSpecies and also include a negative extraction control. A subset of the combined condition were not properly colonised by *H.hepaticus* and excluded from later analyses. Further details can be found in Jackson et al. (2020, doi: 10.1101/2020.08.19.257501).

References

To come...

Examples

data(oligoMeta)