nsclc_maf {ICBioMark}

Non-Small Cell Lung Cancer MAF Data

Description

A pre-loaded mutation dataset from Campbell et. al (2016), downloaded from The Cancer Genome Atlas.

Usage

nsclc_maf

Format

An annotated mutation dataframe with 6 columns and 299855 rows:

Tumor_Sample_Barcode

A sample id for each mutation.

Hugo_Symbol

The name of the gene location for each mutation.

Variant_Classification

The mutation type for each mutation.

Chromosome

Chromosome on which the mutation occurred.

Start_Position

Start nucleotide location for mutation.

End_Position

End nucleotide location for mutation.

Source

https://www.cbioportal.org/study/summary?id=nsclc_tcga_broad_2016