example_tmb_tables {ICBioMark}R Documentation

Tumour Mutation Burden of Example Train, Validation and Test Data.

Description

An example output produced by using the function get_biomarker_tables(), applied to the example MAF data pre-loaded in example_maf_data$maf.

Usage

example_tmb_tables

Format

A list with threeobjects: 'train', 'val' and 'test'. Each is a dataframe with two columns:

Tumor_Sample_Barcode

A unique ID for each sample.

TMB

The value of Tumour Mutation Burden for that sample.


[Package ICBioMark version 0.1.4 Index]