haplotype-class {HaploSim}

Class "haplotype" ~~~

Description

Definition of 'haplotype' class.

Objects from the Class

Objects can be created by calls of the form new("haplotype", ...).

Slots

snp:

Object of class "integer" containing the positions on the genome where the haplotype has a 1 allele. The number of snp positions is the genome size in Morgan times the number of decimal positions, both stored in 'haploList' objects.

qtl:

Object of class "list". Names of the list are the QTL positions, on the same scale as snp positions. Objects in the list are the QTL alleles.

hID:

Object of class "numeric" identifying the current object of class 'haplotype'.

phID0:

Object of class "numeric" pointing to the first parental haplotype.

phID1:

Object of class "numeric" pointing to the second parental haplotype.

Methods

No methods defined with class "haplotype" in the signature.

See Also

SampleHaplotype, SampleHaplotypes, haploList

Examples

showClass("haplotype")