sHLAdata {HLAtools}

Synthetic HLA Data for use with Package Examples

Description

A BIGDAWG-formatted data frame of 18 columns and 47 rows containing synthetic HLA-A, -C, -B, -DRB1, -DQA1, -DQB1, -DPA1, and -DPB1 genotype data for 24 control subjects and 23 case subjects. Allele name data were recorded under IPD-IMGT/HLA Database release version 3.56.0. These are synthetic data generated for the imaginary UchiTelle population, and do not represent biologically-derived HLA genotypes.

Usage

data(sHLAdata)

Format

A data frame of 18 columns and 47 rows.

Source

These synthetic data were generated as part of the 13th International HLA Workshop to demonstrate PyPop functions. See http://pypop.org/docs/guide-chapter-usage.html#data-minimal-noheader for additional details.