HMMVB-class {HDclust}

Class "HMMVB" to represent a Hidden Markov Model on Variable Blocks (HMM-VB).

Description

An S4 class to represent a Hidden Markov Model on Variable Blocks (HMM-VB). New instances of the class are created by hmmvbTrain.

Methods

• show signature(object = "HMMVB") : show parameters of the HMM-VB.

• getHmmChain signature(object = "HMMVB") : accessor for 'HmmChain' slot.

• getDiagCov signature(object = "HMMVB") : accessor for 'diagCov' slot.

• getBIC signature(object = "HMMVB") : accessor for 'BIC' slot.

• getVb signature(object = "HMMVB") : accessor for 'VbStructure' slot.

Slots

VbStructure

An object of class 'VB' that contains the variable block structure.

HmmChain

A list of objects of class 'HMM' with trained Hidden Markov Models for each variable block.

diagCov

A logical value indicating whether or not covariance matrices for mixture models are diagonal.

Loglikehd

Loglikelihood value for each data point.

BIC

BIC value for provided variable block structure or optimal BIC value for found variable block structure.