summary.ResScanOutputUniFunct {HDSpatialScan}

Summary of the clusters obtained with a univariate functional scan function (PFSS, NPFSS, DFFSS or URBFSS).

Description

This function gives a summary of the clusters in a table

Usage

## S3 method for class 'ResScanOutputUniFunct'
summary(
  object,
  type_summ = "param",
  digits = 3,
  quantile.type = 7,
  only.MLC = FALSE,
  ...
)

Arguments

object

ResScanOutputUniFunct. Output of a univariate functional scan function (PFSS, NPFSS, DFFSS or URBFSS).

type_summ

character. "param" or "nparam". "param" gives the mean and the sd for each variable in the clusters, outside, and globally and "nparam" gives the Q25, Q50 and Q75 quantiles for each variables in the clusters, outside, and globally.

digits

integer. Number of decimals in the output.

quantile.type

An integer between 1 and 9 (see function quantile). Ignored if type_summ is "param"

only.MLC

logical. Should we summarize only the MLC or all the significant clusters?

...

Further arguments to be passed to or from methods.

Value

No value returned, displays the results in the console

Examples

library(sp)
data("map_sites")
data("funi_data")
coords <- coordinates(map_sites)

res_npfss <- SpatialScan(method = "NPFSS", data = funi_data, sites_coord = coords,
system = "WGS84", mini = 1, maxi = nrow(coords)/2)$NPFSS

summary(object = res_npfss, type_summ = "nparam")