plotSummary.ResScanOutputMulti {HDSpatialScan} | R Documentation |
Plots the mean or median spider chart of the clusters detected by a multivariate scan function (MG or MNP)
Description
This function plots the mean or median spider chart of the clusters detected by a multivariate scan function (MG or MNP).
Usage
## S3 method for class 'ResScanOutputMulti'
plotSummary(x, type = "mean", colors = "red", only.MLC = FALSE, ...)
Arguments
x |
ResScanOutputMulti. Output of a multivariate scan function (MG or MNP). |
type |
character. "mean" or "median". If "mean": the means in the clusters are plotted in solid lines, outside the cluster in dots, the global mean is in black. If "median": the medians in the clusters are plotted in solid lines, outside the cluster in dots, the global median is in black. |
colors |
character. The colors to plot the clusters' summaries. If length(colors)==1 then all the clusters will be plotted in this color. Else there must be the same number of elements in colors than the number of clusters |
only.MLC |
logical. Should we plot only the MLC or all the significant clusters? |
... |
Further arguments to be passed to or from methods. |
Value
No value returned, plots the spider chart.
Examples
library(sp)
data("map_sites")
data("multi_data")
coords <- coordinates(map_sites)
res_mnp <- SpatialScan(method = "MNP", data=multi_data, sites_coord = coords,
system = "WGS84", mini = 1, maxi = nrow(coords)/2,
variable_names = c("NO2", "O3", "PM10", "PM2.5"))$MNP
plotSummary(x = res_mnp, type = "mean")